Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema protein | BCL90_3611 | Not Available | Positive | 4059873 - 4060430 | 20702.0 |
| uncharacterized protein duf3137 | BCL90_3612 | Not Available | Positive | 4060430 - 4061386 | 36231.5 |
| two-component system cell cycle response regulator divk | BCL90_3613 | Not Available | Negative | 4061608 - 4061973 | 13563.1 |
| cheb methylesterase | BCL90_3614 | Not Available | Negative | 4061994 - 4062578 | 21148.4 |
| cher-type mcp methyltransferase | BCL90_3615 | Not Available | Negative | 4062563 - 4063381 | 32027.5 |
| response regulator receiver domain-containing protein | BCL90_3616 | Not Available | Negative | 4063385 - 4063756 | 13437.6 |
| signal transduction histidine kinase | BCL90_3617 | Not Available | Negative | 4063771 - 4067355 | 133879.0 |
| phospho-acceptor domain-containing protein | BCL90_3618 | Not Available | Negative | 4067374 - 4068507 | 42979.0 |
| hypothetical protein | BCL90_3619 | Not Available | Negative | 4068612 - 4069457 | 30840.0 |
| hypothetical protein | BCL90_3620 | Not Available | Positive | 4069674 - 4070126 | 17821.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
