Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3591 | Not Available | Negative | 4039008 - 4039241 | 9158.81 |
| hypothetical protein | BCL90_3592 | Not Available | Negative | 4039247 - 4039513 | 10324.9 |
| hypothetical protein | BCL90_3593 | Not Available | Negative | 4040036 - 4040389 | 13853.0 |
| rna polymerase sigma factor (sigma-70 family) | BCL90_3594 | Not Available | Negative | 4040400 - 4040951 | 21658.3 |
| ketopantoate reductase | BCL90_3595 | Not Available | Negative | 4041075 - 4042001 | 33772.1 |
| wd40 repeat protein | BCL90_3596 | Not Available | Negative | 4042026 - 4042961 | 34023.6 |
| uncharacterized protein duf4197 | BCL90_3597 | Not Available | Negative | 4043123 - 4043884 | 27688.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_3598 | Not Available | Positive | 4044096 - 4044674 | 22381.9 |
| carboxypeptidase-like protein | BCL90_3599 | Not Available | Positive | 4044667 - 4045971 | 47270.5 |
| paib family negative transcriptional regulator | BCL90_3600 | Not Available | Positive | 4046105 - 4046719 | 23071.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
