Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-6-naphthoate synthase | BCL90_3571 | Not Available | Positive | 4015702 - 4016550 | 31694.0 |
| dna-binding response ompr family regulator | BCL90_3572 | Not Available | Negative | 4016735 - 4017430 | 26510.1 |
| two-component system phosphate regulon sensor histidine kinase phor | BCL90_3573 | Not Available | Negative | 4017580 - 4019400 | 69219.7 |
| uncharacterized protein duf3127 | BCL90_3574 | Not Available | Negative | 4019674 - 4020039 | 13413.7 |
| putative n6-adenine-specific dna methylase | BCL90_3575 | Not Available | Positive | 4020108 - 4021289 | 43984.1 |
| hypothetical protein | BCL90_3576 | Not Available | Positive | 4021357 - 4021851 | 19418.1 |
| helix-turn-helix protein | BCL90_3577 | Not Available | Positive | 4022153 - 4022434 | 10535.7 |
| uncharacterized protein | BCL90_3578 | Not Available | Positive | 4022508 - 4023152 | 24215.9 |
| putative dna modification/repair radical sam protein | BCL90_3579 | Not Available | Positive | 4023418 - 4024674 | 47650.9 |
| putative dna metabolism protein | BCL90_3580 | Not Available | Positive | 4024698 - 4025462 | 29852.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
