Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3561 | Not Available | Negative | 4003624 - 4003779 | 6265.67 |
| putative acyltransferase | BCL90_3562 | Not Available | Positive | 4004069 - 4005229 | 43162.7 |
| laci family transcriptional regulator | BCL90_3563 | Not Available | Positive | 4005266 - 4006285 | 37393.2 |
| uncharacterized lipoprotein yddw (upf0748 family) | BCL90_3564 | Not Available | Negative | 4006294 - 4007835 | 58832.9 |
| hypothetical protein | BCL90_3565 | Not Available | Positive | 4008039 - 4008941 | 34117.7 |
| hamp domain-containing protein | BCL90_3566 | Not Available | Negative | 4008974 - 4012705 | 142103.0 |
| [acyl-carrier-protein] s-malonyltransferase | BCL90_3567 | Not Available | Negative | 4012790 - 4013671 | 30935.4 |
| gtp cyclohydrolase i | BCL90_3568 | Not Available | Negative | 4013810 - 4014445 | 23954.9 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | BCL90_3569 | Not Available | Negative | 4014458 - 4014868 | 15799.7 |
| futalosine hydrolase | BCL90_3570 | Not Available | Positive | 4014962 - 4015585 | 22733.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
