Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3550 | Not Available | Negative | 3987061 - 3987276 | 8383.15 |
| outer membrane protein with beta-barrel domain | BCL90_3551 | Not Available | Positive | 3987537 - 3988139 | 21654.8 |
| uncharacterized protein duf4397 | BCL90_3553 | Not Available | Negative | 3988715 - 3989512 | 29075.6 |
| susd-like starch-binding protein associating with outer membrane | BCL90_3554 | Not Available | Negative | 3989537 - 3991147 | 59895.1 |
| tonb-linked susc/raga family outer membrane protein | BCL90_3555 | Not Available | Negative | 3991156 - 3994239 | 112233.0 |
| deor family transcriptional regulator | BCL90_3556 | Not Available | Positive | 3994481 - 3995227 | 27670.8 |
| susd-like starch-binding protein associating with outer membrane | BCL90_3557 | Not Available | Negative | 3995265 - 3996560 | 46528.8 |
| tonb-linked susc/raga family outer membrane protein | BCL90_3558 | Not Available | Negative | 3996578 - 3999715 | 113641.0 |
| anhydro-n-acetylmuramic acid kinase | BCL90_3559 | Not Available | Negative | 3999821 - 4001017 | 43682.5 |
| glucosamine-6-phosphate deaminase | BCL90_3560 | Not Available | Positive | 4001167 - 4003092 | 72491.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
