Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | BCL90_3539 | Not Available | Negative | 3971501 - 3972574 | 40151.9 |
| hypothetical protein | BCL90_3541 | Not Available | Negative | 3973116 - 3973289 | 6566.28 |
| udp-2,3-diacylglucosamine hydrolase | BCL90_3542 | Not Available | Negative | 3973334 - 3974083 | 28885.5 |
| prolyl oligopeptidase | BCL90_3543 | Not Available | Positive | 3974446 - 3976572 | 79291.1 |
| thioredoxin reductase (nadph) | BCL90_3544 | Not Available | Positive | 3976858 - 3977868 | 36898.6 |
| 2fe-2s ferredoxin | BCL90_3545 | Not Available | Positive | 3977912 - 3978238 | 11874.3 |
| glycosyl hydrolase family 2 | BCL90_3546 | Not Available | Negative | 3978517 - 3981126 | 98449.2 |
| putative alpha-1,2-mannosidase | BCL90_3547 | Not Available | Negative | 3981223 - 3983481 | 83516.6 |
| alpha-l-fucosidase | BCL90_3548 | Not Available | Negative | 3983834 - 3985132 | 49469.9 |
| s41a family c-terminal processing peptidase-3 | BCL90_3549 | Not Available | Negative | 3985181 - 3986872 | 62038.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
