Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3528 | Not Available | Negative | 3959745 - 3960482 | 27773.2 |
| hypothetical protein | BCL90_3529 | Not Available | Negative | 3960720 - 3961040 | 12297.4 |
| hypothetical protein | BCL90_3530 | Not Available | Positive | 3961481 - 3962458 | 37628.9 |
| hypothetical protein | BCL90_3531 | Not Available | Positive | 3962722 - 3962967 | 9198.61 |
| hypothetical protein | BCL90_3532 | Not Available | Positive | 3963067 - 3964422 | 51565.0 |
| regulatory helix-turn-helix arac family protein | BCL90_3533 | Not Available | Negative | 3964512 - 3964619 | 4128.94 |
| putative repeat protein (tigr01451 family) | BCL90_3535 | Not Available | Negative | 3964620 - 3968914 | 148918.0 |
| arac family transcriptional regulator | BCL90_3536 | Not Available | Negative | 3969033 - 3970154 | 42719.8 |
| arac-like dna-binding protein | BCL90_3537 | Not Available | Negative | 3970160 - 3971164 | 38727.8 |
| Trna-asp | Not Available | Not Available | Positive | 3971322 - 3971398 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
