Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3506 | Not Available | Positive | 3944790 - 3944975 | 6747.26 |
| peptidase s41-like protein | BCL90_3507 | Not Available | Positive | 3945029 - 3946471 | 54770.4 |
| histidine kinase | BCL90_3508 | Not Available | Positive | 3946477 - 3947592 | 43111.6 |
| lyttr family two component transcriptional regulator | BCL90_3509 | Not Available | Positive | 3947589 - 3948314 | 27754.0 |
| response regulator receiver domain-containing protein | BCL90_3510 | Not Available | Positive | 3948373 - 3948732 | 13515.4 |
| prtrc genetic system thif family protein | BCL90_3511 | Not Available | Negative | 3948940 - 3949743 | 29626.3 |
| prtrc genetic system protein b | BCL90_3512 | Not Available | Negative | 3949740 - 3950462 | 27718.4 |
| hypothetical protein | BCL90_3513 | Not Available | Negative | 3950455 - 3951696 | 48119.9 |
| prtrc genetic system protein c | BCL90_3514 | Not Available | Negative | 3951647 - 3951865 | 8129.76 |
| prtrc genetic system protein e | BCL90_3515 | Not Available | Negative | 3951894 - 3952415 | 19803.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
