Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3496 | Not Available | Negative | 3933260 - 3933691 | 16203.5 |
| hypothetical protein | BCL90_3497 | Not Available | Negative | 3933785 - 3934018 | 8771.41 |
| helix-turn-helix protein | BCL90_3498 | Not Available | Positive | 3934277 - 3936007 | 68055.8 |
| hypothetical protein | BCL90_3499 | Not Available | Positive | 3936104 - 3936805 | 26683.7 |
| hlyd family secretion protein | BCL90_3500 | Not Available | Negative | 3936891 - 3938174 | 48792.8 |
| atp-binding cassette subfamily b protein | BCL90_3501 | Not Available | Negative | 3938186 - 3940372 | 82291.8 |
| peroxiredoxin | BCL90_3502 | Not Available | Negative | 3940433 - 3941584 | 43274.2 |
| hypothetical protein | BCL90_3503 | Not Available | Negative | 3941594 - 3942265 | 25399.2 |
| hypothetical protein | BCL90_3504 | Not Available | Negative | 3942335 - 3942508 | 6226.38 |
| peptidase c39-like protein | BCL90_3505 | Not Available | Negative | 3942681 - 3944252 | 59760.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
