Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf262 | BCL90_3486 | Not Available | Negative | 3918849 - 3921947 | 121337.0 |
| hypothetical protein | BCL90_3487 | Not Available | Negative | 3922448 - 3923515 | 39820.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_3488 | Not Available | Positive | 3923664 - 3924260 | 22998.8 |
| hypothetical protein | BCL90_3489 | Not Available | Negative | 3924359 - 3924766 | 15291.0 |
| fecr family protein | BCL90_3490 | Not Available | Positive | 3924918 - 3926123 | 44699.4 |
| hypothetical protein | BCL90_3491 | Not Available | Negative | 3926166 - 3926312 | 5134.1 |
| tonb-linked susc/raga family outer membrane protein | BCL90_3492 | Not Available | Positive | 3926461 - 3929967 | 129934.0 |
| susd-like starch-binding protein associating with outer membrane | BCL90_3493 | Not Available | Positive | 3929976 - 3931370 | 52319.4 |
| thiol-disulfide isomerase/thioredoxin | BCL90_3494 | Not Available | Positive | 3931394 - 3932890 | 57792.1 |
| hypothetical protein | BCL90_3495 | Not Available | Negative | 3932928 - 3933170 | 8678.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
