Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3475 | Not Available | Positive | 3897073 - 3897399 | 12993.6 |
| nacht domain-containing protein | BCL90_3476 | Not Available | Positive | 3897731 - 3902011 | 167606.0 |
| hypothetical protein | BCL90_3478 | Not Available | Negative | 3903345 - 3909401 | 233411.0 |
| hypothetical protein | BCL90_3479 | Not Available | Positive | 3909984 - 3910769 | 28361.6 |
| hypothetical protein | BCL90_3480 | Not Available | Negative | 3911008 - 3911433 | 16272.7 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_3481 | Not Available | Negative | 3911452 - 3911691 | 9764.67 |
| dna-binding xre family transcriptional regulator | BCL90_3482 | Not Available | Negative | 3911748 - 3912533 | 30313.8 |
| dna polymerase-4 | BCL90_3483 | Not Available | Positive | 3912609 - 3913766 | 43855.4 |
| dna polymerase iii alpha subunit | BCL90_3484 | Not Available | Positive | 3913769 - 3916822 | 117476.0 |
| aaa domain-containing protein | BCL90_3485 | Not Available | Negative | 3916911 - 3918806 | 72898.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
