Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf4141 | BCL90_3455 | Not Available | Positive | 3873818 - 3874441 | 23477.4 |
| conjugative transposon traj protein | BCL90_3456 | Not Available | Positive | 3874468 - 3875460 | 36572.8 |
| conjugative transposon trak protein | BCL90_3457 | Not Available | Positive | 3875486 - 3876109 | 24088.8 |
| hypothetical protein | BCL90_3458 | Not Available | Positive | 3876120 - 3876548 | 16433.8 |
| hypothetical protein | BCL90_3459 | Not Available | Positive | 3876568 - 3876840 | 10564.9 |
| conjugative transposon tram protein | BCL90_3460 | Not Available | Positive | 3876827 - 3878137 | 47372.4 |
| conjugative transposon tran protein | BCL90_3461 | Not Available | Positive | 3878162 - 3879088 | 35661.0 |
| conjugative transposon protein trao | BCL90_3462 | Not Available | Positive | 3879108 - 3879671 | 20482.5 |
| uncharacterized protein duf3872 | BCL90_3463 | Not Available | Positive | 3879687 - 3880154 | 17394.3 |
| rhs repeat-associated protein | BCL90_3464 | Not Available | Positive | 3880628 - 3884038 | 128323.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
