Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative purr-regulated permease perm | BCL90_3424 | Not Available | Negative | 3839126 - 3840250 | 41479.0 |
| trna modification gtpase trme | BCL90_3425 | Not Available | Positive | 3840792 - 3842150 | 49368.5 |
| excisionase family dna binding protein | BCL90_3426 | Not Available | Positive | 3842400 - 3842987 | 22209.3 |
| phage integrase family protein | BCL90_3427 | Not Available | Positive | 3843142 - 3844338 | 45809.0 |
| excisionase family dna binding protein | BCL90_3428 | Not Available | Positive | 3844372 - 3844713 | 13495.5 |
| hypothetical protein | BCL90_3429 | Not Available | Negative | 3844682 - 3844819 | 5107.03 |
| rtec protein | BCL90_3430 | Not Available | Positive | 3845164 - 3845997 | 32555.0 |
| helix-turn-helix protein | BCL90_3431 | Not Available | Positive | 3846206 - 3846592 | 15145.2 |
| uncharacterized protein duf3945 | BCL90_3432 | Not Available | Positive | 3846668 - 3848161 | 55927.8 |
| dna topoisomerase-3 | BCL90_3433 | Not Available | Positive | 3848187 - 3850313 | 80040.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
