Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3414 | Not Available | Positive | 3826534 - 3826791 | 9596.44 |
| cspa family cold shock protein | BCL90_3415 | Not Available | Negative | 3827557 - 3827796 | 9018.14 |
| lyttr family two component transcriptional regulator | BCL90_3416 | Not Available | Positive | 3827902 - 3828627 | 28021.6 |
| histone h1-like protein hc1 | BCL90_3417 | Not Available | Negative | 3828712 - 3828891 | 6559.82 |
| arac-like dna-binding protein | BCL90_3418 | Not Available | Positive | 3829170 - 3830381 | 46876.0 |
| crp-like camp-binding protein | BCL90_3419 | Not Available | Positive | 3830556 - 3831167 | 23761.9 |
| methionyl aminopeptidase | BCL90_3420 | Not Available | Positive | 3831255 - 3832055 | 29112.8 |
| d-lactate dehydrogenase | BCL90_3421 | Not Available | Negative | 3832131 - 3833135 | 36594.2 |
| beta-galactosidase/beta-glucuronidase | BCL90_3422 | Not Available | Negative | 3833199 - 3835946 | 103124.0 |
| carboxypeptidase family protein | BCL90_3423 | Not Available | Positive | 3836224 - 3838866 | 98680.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
