Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pkd family protein | BCL90_3393 | Not Available | Negative | 3802342 - 3803784 | 53380.1 |
| uncharacterized protein duf4843 | BCL90_3394 | Not Available | Negative | 3803771 - 3804580 | 30633.6 |
| susd-like starch-binding protein associating with outer membrane | BCL90_3395 | Not Available | Negative | 3804611 - 3806101 | 56476.3 |
| tonb-linked susc/raga family outer membrane protein | BCL90_3396 | Not Available | Negative | 3806134 - 3809535 | 127319.0 |
| fecr family protein | BCL90_3397 | Not Available | Negative | 3809741 - 3810859 | 41581.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_3398 | Not Available | Negative | 3811004 - 3811627 | 24184.4 |
| hypothetical protein | BCL90_3399 | Not Available | Positive | 3811898 - 3812164 | 9753.87 |
| heme oxygenase | BCL90_3400 | Not Available | Negative | 3812210 - 3812776 | 20769.0 |
| peptidase s41-like protein | BCL90_3402 | Not Available | Negative | 3815214 - 3816491 | 46453.6 |
| hypothetical protein | BCL90_3403 | Not Available | Negative | 3816498 - 3817475 | 35842.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
