Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3373 | Not Available | Positive | 3778825 - 3779124 | 11339.8 |
| voltage-gated potassium channel | BCL90_3374 | Not Available | Negative | 3779172 - 3779996 | 30676.3 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | BCL90_3375 | Not Available | Negative | 3780029 - 3780880 | 30739.8 |
| uncharacterized protein duf481 | BCL90_3376 | Not Available | Positive | 3781322 - 3782041 | 27386.6 |
| hypothetical protein | BCL90_3377 | Not Available | Negative | 3782007 - 3782174 | 6572.13 |
| uroporphyrinogen-iii c-methyltransferase | BCL90_3378 | Not Available | Negative | 3782374 - 3783138 | 27661.8 |
| assimilatory nitrite reductase (nad(p)h) large subunit precursor | BCL90_3379 | Not Available | Positive | 3783391 - 3785904 | 91884.3 |
| assimilatory nitrite reductase (nad(p)h) small subunit | BCL90_3380 | Not Available | Positive | 3785941 - 3786288 | 12797.1 |
| hypothetical protein | BCL90_3381 | Not Available | Positive | 3786347 - 3786742 | 14072.3 |
| nnp family nitrate/nitrite transporter-like mfs transporter | BCL90_3382 | Not Available | Positive | 3786781 - 3788148 | 49183.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
