Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix protein | BCL90_3363 | Not Available | Positive | 3766494 - 3767405 | 35643.2 |
| short-subunit dehydrogenase | BCL90_3364 | Not Available | Positive | 3767488 - 3768327 | 29825.7 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | BCL90_3365 | Not Available | Positive | 3768433 - 3769353 | 33027.2 |
| putative alpha-1,2-mannosidase | BCL90_3366 | Not Available | Negative | 3769832 - 3772117 | 86147.5 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | BCL90_3367 | Not Available | Positive | 3772629 - 3773720 | 40470.3 |
| hypothetical protein | BCL90_3368 | Not Available | Negative | 3773983 - 3774402 | 16162.3 |
| response regulator receiver domain-containing protein | BCL90_3369 | Not Available | Positive | 3774590 - 3774952 | 13859.9 |
| fmn-dependent nadh-azoreductase | BCL90_3370 | Not Available | Negative | 3775040 - 3775636 | 21628.8 |
| alpha-glucosidase | BCL90_3371 | Not Available | Negative | 3775862 - 3777823 | 74335.6 |
| putative membrane protein | BCL90_3372 | Not Available | Negative | 3777972 - 3778658 | 25059.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
