Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+-dicarboxylate symporter | BCL90_3353 | Not Available | Negative | 3756216 - 3757592 | 49890.8 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_3354 | Not Available | Positive | 3757895 - 3758392 | 19478.3 |
| hypothetical protein | BCL90_3355 | Not Available | Positive | 3758379 - 3758978 | 23161.6 |
| uncharacterized protein duf922 | BCL90_3356 | Not Available | Positive | 3759055 - 3759669 | 24292.0 |
| diacylglycerol kinase (atp) | BCL90_3357 | Not Available | Negative | 3759658 - 3760029 | 13519.0 |
| hypothetical protein | BCL90_3358 | Not Available | Negative | 3760290 - 3760901 | 23207.7 |
| hexosaminidase | BCL90_3359 | Not Available | Negative | 3760949 - 3762859 | 70585.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | BCL90_3360 | Not Available | Negative | 3763369 - 3764619 | 43792.1 |
| putative oxidoreductase | BCL90_3361 | Not Available | Negative | 3764837 - 3765607 | 27854.2 |
| tetr family transcriptional regulator | BCL90_3362 | Not Available | Negative | 3765759 - 3766346 | 21372.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
