Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease r | BCL90_3343 | Not Available | Positive | 3743017 - 3745149 | 80926.7 |
| geranylgeranyl diphosphate synthase type ii | BCL90_3344 | Not Available | Positive | 3745195 - 3746169 | 36194.3 |
| hypothetical protein | BCL90_3345 | Not Available | Negative | 3746280 - 3747119 | 30331.8 |
| large subunit ribosomal protein l27 | BCL90_3346 | Not Available | Negative | 3747667 - 3748083 | 14624.7 |
| lsu ribosomal protein l21p | BCL90_3347 | Not Available | Negative | 3748136 - 3748447 | 11399.0 |
| glpgli family protein | BCL90_3348 | Not Available | Positive | 3749462 - 3750418 | 35377.6 |
| carboxypeptidase family protein | BCL90_3349 | Not Available | Positive | 3750415 - 3753075 | 100332.0 |
| blar1 peptidase m56 | BCL90_3350 | Not Available | Negative | 3753280 - 3754776 | 57248.4 |
| putative transcriptional regulator | BCL90_3351 | Not Available | Negative | 3754783 - 3755145 | 13981.9 |
| hypothetical protein | BCL90_3352 | Not Available | Negative | 3755630 - 3756130 | 19273.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
