Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recq | BCL90_3323 | Not Available | Negative | 3712855 - 3715083 | 83743.6 |
| arabinose-5-phosphate isomerase | BCL90_3324 | Not Available | Positive | 3715136 - 3716104 | 34498.0 |
| mannose-1-phosphate guanylyltransferase | BCL90_3325 | Not Available | Positive | 3716120 - 3717211 | 41008.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_3326 | Not Available | Positive | 3717616 - 3718191 | 22426.9 |
| fecr family protein | BCL90_3327 | Not Available | Positive | 3718261 - 3719415 | 43268.9 |
| tonb-linked susc/raga family outer membrane protein | BCL90_3328 | Not Available | Positive | 3719604 - 3722912 | 122549.0 |
| ragb/susd domain-containing protein | BCL90_3329 | Not Available | Positive | 3722922 - 3724301 | 52036.2 |
| peroxiredoxin | BCL90_3330 | Not Available | Positive | 3724312 - 3725490 | 43695.8 |
| zinc protease | BCL90_3331 | Not Available | Positive | 3725565 - 3728423 | 107062.0 |
| arginyl-trna synthetase | BCL90_3332 | Not Available | Negative | 3728741 - 3730513 | 66656.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
