Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (e3) component | BCL90_3303 | Not Available | Negative | 3692742 - 3694124 | 50133.0 |
| hypothetical protein | BCL90_3304 | Not Available | Positive | 3694304 - 3694438 | 5044.72 |
| hypothetical protein | BCL90_3305 | Not Available | Negative | 3694551 - 3694925 | 14215.6 |
| satd family protein | BCL90_3306 | Not Available | Negative | 3694922 - 3695557 | 24488.7 |
| hypothetical protein | BCL90_3307 | Not Available | Negative | 3695707 - 3695847 | 5637.05 |
| aminopeptidase n | BCL90_3308 | Not Available | Negative | 3695883 - 3698444 | 98160.2 |
| mn2+/fe2+ nramp family transporter | BCL90_3309 | Not Available | Negative | 3698457 - 3699641 | 41437.3 |
| upf0271 protein | BCL90_3310 | Not Available | Negative | 3699638 - 3700399 | 27009.8 |
| antagonist of kipi | BCL90_3311 | Not Available | Negative | 3700396 - 3701400 | 36668.1 |
| inhibitor of kina | BCL90_3312 | Not Available | Negative | 3701397 - 3702137 | 26752.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
