Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconate dehydrogenase | BCL90_3272 | Not Available | Positive | 3654682 - 3656097 | 52301.4 |
| glucose-6-phosphate 1-dehydrogenase | BCL90_3273 | Not Available | Positive | 3656128 - 3657642 | 57981.1 |
| 6-phosphogluconolactonase | BCL90_3274 | Not Available | Positive | 3657765 - 3658490 | 27371.4 |
| cysteine synthase b | BCL90_3275 | Not Available | Negative | 3658762 - 3659634 | 31623.0 |
| serine o-acetyltransferase | BCL90_3276 | Not Available | Negative | 3659646 - 3660458 | 30173.3 |
| hypothetical protein | BCL90_3277 | Not Available | Positive | 3661700 - 3661885 | 7099.82 |
| putative heme-binding domain-containing protein | BCL90_3278 | Not Available | Negative | 3661946 - 3664552 | 95528.4 |
| linoleoyl-coa desaturase | BCL90_3279 | Not Available | Positive | 3665283 - 3666443 | 44579.4 |
| gdsl-like lipase/acylhydrolase family protein | BCL90_3280 | Not Available | Positive | 3666859 - 3667446 | 23041.6 |
| esterase/lipase superfamily enzyme | BCL90_3281 | Not Available | Positive | 3667512 - 3668240 | 28305.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
