Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | BCL90_3262 | Not Available | Negative | 3640553 - 3641452 | 33806.4 |
| calcineurin-like phosphoesterase family protein | BCL90_3263 | Not Available | Negative | 3641710 - 3643119 | 53226.9 |
| hypothetical protein | BCL90_3264 | Not Available | Negative | 3643200 - 3644735 | 54417.4 |
| susd-like starch-binding protein associating with outer membrane | BCL90_3265 | Not Available | Negative | 3644748 - 3646328 | 58396.2 |
| tonb-linked susc/raga family outer membrane protein | BCL90_3266 | Not Available | Negative | 3646336 - 3649905 | 129403.0 |
| fecr family protein | BCL90_3267 | Not Available | Negative | 3649963 - 3650964 | 38349.1 |
| hypothetical protein | BCL90_3268 | Not Available | Negative | 3651393 - 3651557 | 6176.52 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_3269 | Not Available | Negative | 3651805 - 3652371 | 22157.8 |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | BCL90_3270 | Not Available | Negative | 3652436 - 3653671 | 48463.3 |
| polyphosphate glucokinase | BCL90_3271 | Not Available | Positive | 3653836 - 3654594 | 27998.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
