Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ppk2 family polyphosphate:nucleotide phosphotransferase | BCL90_3252 | Not Available | Negative | 3628171 - 3629049 | 33928.2 |
| penicillin-binding protein 1a | BCL90_3253 | Not Available | Positive | 3629193 - 3631649 | 93724.9 |
| tol biopolymer transport system component | BCL90_3254 | Not Available | Positive | 3631824 - 3634997 | 119063.0 |
| metallo-beta-lactamase class b | BCL90_3255 | Not Available | Positive | 3635027 - 3635884 | 32177.7 |
| putative endonuclease | BCL90_3256 | Not Available | Negative | 3636184 - 3636585 | 15741.3 |
| dna-binding xre family transcriptional regulator | BCL90_3257 | Not Available | Positive | 3636668 - 3637444 | 29389.1 |
| hypothetical protein | BCL90_3258 | Not Available | Positive | 3637525 - 3637977 | 16651.4 |
| 8-amino-7-oxononanoate synthase | BCL90_3259 | Not Available | Positive | 3638052 - 3639173 | 41271.4 |
| dethiobiotin synthetase | BCL90_3260 | Not Available | Positive | 3639174 - 3639782 | 22349.1 |
| lysophospholipase l1-like esterase | BCL90_3261 | Not Available | Negative | 3639830 - 3640525 | 26261.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
