Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3231 | Not Available | Positive | 3602365 - 3602556 | 6928.11 |
| lanthionine synthetase-like protein | BCL90_3232 | Not Available | Negative | 3602596 - 3604491 | 71732.1 |
| thiopeptide-type bacteriocin biosynthesis protein | BCL90_3233 | Not Available | Negative | 3604497 - 3605378 | 34580.5 |
| lantibiotic biosynthesis dehydratase-like protein | BCL90_3234 | Not Available | Negative | 3605371 - 3608043 | 103424.0 |
| atp-binding cassette subfamily b protein | BCL90_3235 | Not Available | Negative | 3608070 - 3610271 | 82747.1 |
| abc-2 type transport system permease protein | BCL90_3236 | Not Available | Positive | 3610359 - 3611804 | 55086.8 |
| abc-2 type transport system permease protein | BCL90_3237 | Not Available | Positive | 3611791 - 3613215 | 53997.0 |
| iron complex outermembrane receptor protein | BCL90_3238 | Not Available | Positive | 3613249 - 3615501 | 83621.0 |
| diaminopimelate decarboxylase | BCL90_3239 | Not Available | Negative | 3615567 - 3616733 | 43505.7 |
| aspartate kinase | BCL90_3240 | Not Available | Negative | 3617052 - 3618365 | 48714.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
