Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3221 | Not Available | Negative | 3592213 - 3593529 | 49636.4 |
| heat shock protein hsp20 | BCL90_3222 | Not Available | Negative | 3593870 - 3594304 | 16411.1 |
| acyl-coa thioester hydrolase | BCL90_3223 | Not Available | Positive | 3594381 - 3594866 | 18842.9 |
| glycolate oxidase | BCL90_3224 | Not Available | Negative | 3594960 - 3596363 | 50670.9 |
| dihydroneopterin aldolase | BCL90_3225 | Not Available | Negative | 3596365 - 3596733 | 14094.1 |
| glutaryl-coa dehydrogenase | BCL90_3226 | Not Available | Positive | 3596847 - 3598037 | 43604.7 |
| transglutaminase superfamily protein | BCL90_3227 | Not Available | Positive | 3598040 - 3600694 | 102163.0 |
| activator of hsp90 atpase-like protein | BCL90_3228 | Not Available | Positive | 3600681 - 3601061 | 14679.0 |
| hypothetical protein | BCL90_3229 | Not Available | Positive | 3601067 - 3601882 | 29879.4 |
| hypothetical protein | BCL90_3230 | Not Available | Positive | 3601929 - 3602144 | 7672.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
