Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase rhle | BCL90_3211 | Not Available | Negative | 3581883 - 3583181 | 48574.6 |
| hypothetical protein | BCL90_3212 | Not Available | Positive | 3583487 - 3583648 | 6263.53 |
| Trna-pseudo | Not Available | Not Available | Positive | 3583655 - 3583728 | Not Available |
| muramoyltetrapeptide carboxypeptidase | BCL90_3214 | Not Available | Positive | 3584299 - 3585321 | 37882.6 |
| outer membrane protein | BCL90_3215 | Not Available | Positive | 3585649 - 3586944 | 47510.6 |
| hlyd family secretion protein | BCL90_3216 | Not Available | Positive | 3586990 - 3588183 | 42906.4 |
| putative abc transport system atp-binding protein | BCL90_3217 | Not Available | Positive | 3588183 - 3588929 | 27590.1 |
| putative abc transport system permease protein | BCL90_3218 | Not Available | Positive | 3588942 - 3590165 | 43860.8 |
| histidine kinase | BCL90_3219 | Not Available | Positive | 3590287 - 3591354 | 41668.2 |
| lyttr family two component transcriptional regulator | BCL90_3220 | Not Available | Positive | 3591351 - 3592049 | 26467.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
