Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| release factor glutamine methyltransferase | BCL90_3201 | Not Available | Negative | 3572068 - 3572991 | 34563.0 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | BCL90_3202 | Not Available | Positive | 3573019 - 3574074 | 39369.0 |
| eama-like transporter family protein | BCL90_3203 | Not Available | Positive | 3574071 - 3574940 | 31848.7 |
| putative yigz family protein | BCL90_3204 | Not Available | Positive | 3574927 - 3575541 | 23087.9 |
| uridine phosphorylase | BCL90_3205 | Not Available | Positive | 3575696 - 3576556 | 31490.1 |
| uncharacterized protein ybcv (duf1398 family) | BCL90_3206 | Not Available | Negative | 3576800 - 3577195 | 14802.1 |
| aldose 1-epimerase | BCL90_3207 | Not Available | Negative | 3577198 - 3578247 | 39015.4 |
| galactokinase | BCL90_3208 | Not Available | Positive | 3578324 - 3579475 | 42605.8 |
| spou rrna methylase family protein | BCL90_3209 | Not Available | Positive | 3579542 - 3580072 | 19767.8 |
| oop family ompa-ompf porin | BCL90_3210 | Not Available | Positive | 3580382 - 3581722 | 48307.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
