Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter | BCL90_3191 | Not Available | Negative | 3563780 - 3565129 | 50011.2 |
| toxin pare1/3/4 | BCL90_3192 | Not Available | Negative | 3565221 - 3565523 | 11566.0 |
| antitoxin pard1/3/4 | BCL90_3193 | Not Available | Negative | 3565516 - 3565767 | 9500.54 |
| magnesium transporter | BCL90_3194 | Not Available | Negative | 3565829 - 3566950 | 43673.6 |
| wbqc-like protein | BCL90_3195 | Not Available | Negative | 3566954 - 3567565 | 24351.0 |
| kdo2-lipid iv(a) lauroyltransferase | BCL90_3196 | Not Available | Positive | 3567605 - 3568477 | 34163.2 |
| hypothetical protein | BCL90_3197 | Not Available | Positive | 3568483 - 3569496 | 38877.9 |
| thiol-disulfide isomerase/thioredoxin | BCL90_3198 | Not Available | Negative | 3569701 - 3570417 | 27191.8 |
| 3-dehydroquinate dehydratase | BCL90_3199 | Not Available | Negative | 3570429 - 3570845 | 15217.2 |
| integrase/recombinase xerd | BCL90_3200 | Not Available | Positive | 3570895 - 3571794 | 33667.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
