Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine65 synthase | BCL90_3171 | Not Available | Positive | 3540985 - 3541668 | 26381.0 |
| hypothetical protein | BCL90_3172 | Not Available | Positive | 3541707 - 3542441 | 27302.8 |
| mate family multidrug resistance protein | BCL90_3173 | Not Available | Negative | 3542713 - 3544083 | 50217.0 |
| putative dna-binding protein | BCL90_3174 | Not Available | Negative | 3544320 - 3544949 | 23969.0 |
| uncharacterized protein duf4442 | BCL90_3175 | Not Available | Negative | 3544960 - 3545445 | 18836.0 |
| hypothetical protein | BCL90_3176 | Not Available | Positive | 3545769 - 3545978 | 7253.75 |
| mfs transporter | BCL90_3177 | Not Available | Positive | 3546081 - 3547313 | 44575.4 |
| coproporphyrinogen oxidase | BCL90_3178 | Not Available | Positive | 3547429 - 3548322 | 34555.7 |
| endonuclease v | BCL90_3179 | Not Available | Negative | 3548443 - 3549144 | 25901.4 |
| hypothetical protein | BCL90_3180 | Not Available | Negative | 3549289 - 3549507 | 8222.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
