Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-hairpin-helix protein | BCL90_3141 | Not Available | Negative | 3507015 - 3509246 | 85118.6 |
| dna-binding transcriptional merr regulator | BCL90_3142 | Not Available | Negative | 3509397 - 3509732 | 13146.9 |
| alanyl-trna synthetase | BCL90_3143 | Not Available | Positive | 3509849 - 3512467 | 98652.3 |
| hypothetical protein | BCL90_3144 | Not Available | Negative | 3512549 - 3513064 | 20347.0 |
| hypothetical protein | BCL90_3145 | Not Available | Negative | 3513188 - 3513781 | 23244.5 |
| hypothetical protein | BCL90_3146 | Not Available | Positive | 3514102 - 3515289 | 44986.4 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | BCL90_3147 | Not Available | Positive | 3515401 - 3516864 | 54078.8 |
| peroxiredoxin | BCL90_3148 | Not Available | Positive | 3516864 - 3517976 | 41428.8 |
| two-component system alkaline phosphatase synthesis response regulator phop | BCL90_3149 | Not Available | Positive | 3518080 - 3518769 | 25933.6 |
| 23s rrna pseudouridine955/2504/2580 synthase | BCL90_3150 | Not Available | Positive | 3519000 - 3519722 | 27480.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
