Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphoesterase | BCL90_3131 | Not Available | Negative | 3493477 - 3494115 | 23972.0 |
| atp-dependent lhr-like helicase | BCL90_3132 | Not Available | Negative | 3494188 - 3496665 | 93648.5 |
| dna ligase-1 | BCL90_3133 | Not Available | Negative | 3497075 - 3498664 | 61183.2 |
| putative mrna 3-end processing factor | BCL90_3134 | Not Available | Negative | 3498667 - 3499695 | 38552.8 |
| satd family protein | BCL90_3135 | Not Available | Positive | 3499851 - 3500462 | 22445.4 |
| uncharacterized protein duf3307 | BCL90_3136 | Not Available | Positive | 3500462 - 3501172 | 26871.7 |
| dipeptidyl-peptidase-4 | BCL90_3137 | Not Available | Negative | 3501208 - 3503376 | 80923.2 |
| uncharacterized protein duf4412 | BCL90_3138 | Not Available | Negative | 3503475 - 3504122 | 22697.4 |
| methylglutaconyl-coa hydratase | BCL90_3139 | Not Available | Negative | 3504146 - 3504922 | 28635.5 |
| competence protein comec | BCL90_3140 | Not Available | Negative | 3504924 - 3507011 | 80339.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
