Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3111 | Not Available | Negative | 3472355 - 3472720 | 12825.9 |
| ribulose-phosphate 3-epimerase | BCL90_3112 | Not Available | Positive | 3472979 - 3473647 | 24054.4 |
| outer membrane receptor protein involved in fe transport | BCL90_3113 | Not Available | Positive | 3473712 - 3476189 | 93820.3 |
| phosphoserine aminotransferase | BCL90_3114 | Not Available | Positive | 3476598 - 3477671 | 39404.3 |
| d-3-phosphoglycerate dehydrogenase | BCL90_3115 | Not Available | Positive | 3477749 - 3478699 | 33769.8 |
| hypothetical protein | BCL90_3116 | Not Available | Negative | 3478848 - 3478994 | 5600.06 |
| hypothetical protein | BCL90_3117 | Not Available | Negative | 3478975 - 3479493 | 20199.5 |
| hypothetical protein | BCL90_3118 | Not Available | Negative | 3479723 - 3480502 | 29217.4 |
| phosphate starvation-inducible protein phoh | BCL90_3119 | Not Available | Positive | 3480607 - 3481566 | 35272.1 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | BCL90_3120 | Not Available | Positive | 3481619 - 3482614 | 37442.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
