Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit | BCL90_3101 | Not Available | Positive | 3462522 - 3462875 | 13411.9 |
| putative nucleic acid-binding protein | BCL90_3102 | Not Available | Negative | 3462975 - 3463394 | 16077.3 |
| hypothetical protein | BCL90_3103 | Not Available | Negative | 3463398 - 3463658 | 9885.76 |
| methylenetetrahydrofolate dehydrogenase (nadp+)/methenyltetrahydrofolate cyclohydrolase | BCL90_3104 | Not Available | Negative | 3463807 - 3464688 | 31990.9 |
| gtp-binding protein lepa | BCL90_3105 | Not Available | Negative | 3464818 - 3466605 | 66616.7 |
| putative mate family efflux protein | BCL90_3106 | Not Available | Negative | 3466879 - 3468303 | 50841.5 |
| acyl-coa thioester hydrolase/thioesterase-3 | BCL90_3107 | Not Available | Negative | 3468592 - 3469011 | 16211.6 |
| hypothetical protein | BCL90_3108 | Not Available | Positive | 3469121 - 3469312 | 7137.65 |
| small subunit ribosomal protein s15 | BCL90_3109 | Not Available | Positive | 3469672 - 3469956 | 10950.4 |
| polyribonucleotide nucleotidyltransferase | BCL90_3110 | Not Available | Positive | 3470134 - 3472269 | 77519.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
