Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l11 methyltransferase | BCL90_3069 | Not Available | Positive | 3426803 - 3427651 | 31884.7 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | BCL90_3070 | Not Available | Positive | 3427762 - 3429114 | 50441.5 |
| helix-turn-helix protein | BCL90_3071 | Not Available | Positive | 3429182 - 3429502 | 11804.6 |
| drug/metabolite transporter (dmt)-like permease | BCL90_3072 | Not Available | Positive | 3429580 - 3430509 | 33642.3 |
| hypothetical protein | BCL90_3073 | Not Available | Negative | 3430855 - 3431973 | 43232.9 |
| hypothetical protein | BCL90_3074 | Not Available | Negative | 3432047 - 3432238 | 7380.95 |
| condensin subunit scpb | BCL90_3075 | Not Available | Negative | 3432327 - 3432965 | 24329.2 |
| two component regulator with propeller domain | BCL90_3076 | Not Available | Negative | 3433144 - 3436149 | 114948.0 |
| lyttr family two component transcriptional regulator | BCL90_3077 | Not Available | Negative | 3436139 - 3436924 | 29651.6 |
| ferritin-like protein | BCL90_3078 | Not Available | Positive | 3437050 - 3437787 | 26016.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
