Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster assembly protein | BCL90_3058 | Not Available | Negative | 3419988 - 3420314 | 11887.9 |
| nitrogen fixation nifu-like protein | BCL90_3059 | Not Available | Negative | 3420379 - 3420792 | 14846.7 |
| cysteine desulfurase iscs | BCL90_3060 | Not Available | Negative | 3420921 - 3422132 | 44162.1 |
| methylmalonyl-coa epimerase | BCL90_3061 | Not Available | Positive | 3422250 - 3422657 | 15183.4 |
| hypothetical protein | BCL90_3063 | Not Available | Positive | 3423000 - 3423284 | 10756.8 |
| hypothetical protein | BCL90_3064 | Not Available | Negative | 3423281 - 3423979 | 26456.2 |
| hypothetical protein | BCL90_3065 | Not Available | Negative | 3423988 - 3424155 | 6262.72 |
| large subunit ribosomal protein l31 | BCL90_3066 | Not Available | Positive | 3424506 - 3424754 | 9711.64 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | BCL90_3067 | Not Available | Positive | 3424827 - 3425993 | 43066.1 |
| triosephosphate isomerase | BCL90_3068 | Not Available | Positive | 3426041 - 3426802 | 27502.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
