Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3048 | Not Available | Positive | 3409378 - 3409917 | 20543.9 |
| peptidyl-dipeptidase dcp | BCL90_3049 | Not Available | Positive | 3410046 - 3412067 | 76452.8 |
| bacteriocin resistance ydei/ompd-like protein | BCL90_3050 | Not Available | Negative | 3412156 - 3412626 | 17901.9 |
| general stress protein 26 | BCL90_3051 | Not Available | Positive | 3412800 - 3413354 | 20370.9 |
| hypothetical protein | BCL90_3052 | Not Available | Negative | 3413444 - 3413656 | 8276.82 |
| lysyl-trna synthetase class ii | BCL90_3053 | Not Available | Negative | 3413793 - 3415502 | 64778.8 |
| o(6)-alkylguanine repair protein ybaz | BCL90_3054 | Not Available | Negative | 3415782 - 3416108 | 11981.5 |
| uncharacterized protein (tigr02453 family) | BCL90_3055 | Not Available | Positive | 3416257 - 3416946 | 26754.5 |
| long-chain acyl-coa synthetase | BCL90_3056 | Not Available | Negative | 3417010 - 3418926 | 71758.0 |
| hypothetical protein | BCL90_3057 | Not Available | Positive | 3419219 - 3419935 | 25804.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
