Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein | BCL90_3036 | Not Available | Negative | 3401699 - 3402148 | 17500.4 |
| hypothetical protein | BCL90_3037 | Not Available | Positive | 3402416 - 3402844 | 16644.2 |
| ahpc/tsa family protein | BCL90_3040 | Not Available | Positive | 3402810 - 3403346 | 20754.8 |
| manganese transport protein | BCL90_3041 | Not Available | Negative | 3403476 - 3405341 | 68355.8 |
| dtxr family iron (metal) dependent repressor | BCL90_3042 | Not Available | Negative | 3405328 - 3405990 | 24915.9 |
| lrp/asnc family leucine-responsive transcriptional regulator | BCL90_3043 | Not Available | Positive | 3406118 - 3406588 | 18040.3 |
| gxxexxy protein | BCL90_3044 | Not Available | Negative | 3406708 - 3407118 | 15589.4 |
| hypothetical protein | BCL90_3045 | Not Available | Negative | 3407178 - 3407825 | 24208.9 |
| uracil-dna glycosylase | BCL90_3046 | Not Available | Negative | 3407825 - 3408505 | 25328.2 |
| thioredoxin-like protein | BCL90_3047 | Not Available | Negative | 3408745 - 3409224 | 17824.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
