Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | BCL90_3004 | Not Available | Positive | 3369048 - 3370262 | 46497.3 |
| polyphosphate kinase | BCL90_3005 | Not Available | Positive | 3370262 - 3372301 | 78081.6 |
| sdia-regulated protein | BCL90_3006 | Not Available | Positive | 3372353 - 3373267 | 33254.1 |
| surface antigen-like protein | BCL90_3007 | Not Available | Positive | 3373733 - 3377338 | 136980.0 |
| hypothetical protein | BCL90_3008 | Not Available | Positive | 3377480 - 3379906 | 93907.7 |
| hypothetical protein | BCL90_3009 | Not Available | Negative | 3380160 - 3380762 | 21446.7 |
| hypothetical protein | BCL90_3010 | Not Available | Positive | 3380807 - 3381007 | 8027.08 |
| two-component system nitrogen regulation response regulator ntrx | BCL90_3011 | Not Available | Positive | 3381030 - 3381386 | 13207.6 |
| hypothetical protein | BCL90_3012 | Not Available | Positive | 3381440 - 3381835 | 14905.0 |
| phosphotransferase family enzyme | BCL90_3013 | Not Available | Negative | 3381860 - 3383164 | 50188.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
