Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_2994 | Not Available | Negative | 3354041 - 3354784 | 26709.5 |
| hypothetical protein | BCL90_2995 | Not Available | Positive | 3355028 - 3355426 | 15683.9 |
| type i restriction enzyme r subunit | BCL90_2996 | Not Available | Positive | 3355462 - 3358257 | 107797.0 |
| type i restriction enzyme m protein | BCL90_2997 | Not Available | Positive | 3358267 - 3359835 | 60324.0 |
| restriction endonuclease s subunit | BCL90_2998 | Not Available | Positive | 3359835 - 3361562 | 66331.2 |
| restriction system-associated aaa family atpase | BCL90_2999 | Not Available | Positive | 3361543 - 3363195 | 64699.0 |
| hypothetical protein | BCL90_3000 | Not Available | Positive | 3363195 - 3364292 | 43112.4 |
| helix-turn-helix protein | BCL90_3001 | Not Available | Negative | 3364348 - 3364590 | 9137.12 |
| hypothetical protein | BCL90_3002 | Not Available | Positive | 3364910 - 3366229 | 50440.3 |
| alpha-galactosidase | BCL90_3003 | Not Available | Negative | 3366411 - 3368561 | 82109.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
