Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 43 | BCL90_2984 | Not Available | Positive | 3338950 - 3339876 | 35169.1 |
| hypothetical protein | BCL90_2985 | Not Available | Positive | 3340040 - 3341872 | 68919.5 |
| sialate o-acetylesterase | BCL90_2986 | Not Available | Positive | 3341869 - 3343401 | 57396.0 |
| beta-galactosidase/beta-glucuronidase | BCL90_2987 | Not Available | Positive | 3343401 - 3346178 | 105586.0 |
| alpha-l-rhamnosidase | BCL90_2988 | Not Available | Positive | 3346377 - 3349115 | 104448.0 |
| putative neuraminidase | BCL90_2989 | Not Available | Positive | 3349164 - 3350303 | 42078.7 |
| hypothetical protein | BCL90_2990 | Not Available | Positive | 3350290 - 3351843 | 58852.1 |
| sugar phosphate isomerase/epimerase | BCL90_2991 | Not Available | Positive | 3351850 - 3352761 | 34066.6 |
| hypothetical protein | BCL90_2992 | Not Available | Positive | 3352758 - 3353009 | 9693.94 |
| hypothetical protein | BCL90_2993 | Not Available | Negative | 3353533 - 3353952 | 14172.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
