Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sss family solute:na+ symporter | BCL90_2974 | Not Available | Positive | 3321428 - 3322996 | 57403.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | BCL90_2975 | Not Available | Positive | 3323055 - 3323987 | 34659.6 |
| arac-like dna-binding protein | BCL90_2976 | Not Available | Negative | 3324223 - 3325092 | 33654.9 |
| uncharacterized protein duf3826 | BCL90_2977 | Not Available | Positive | 3325424 - 3326149 | 27576.3 |
| tonb-linked susc/raga family outer membrane protein | BCL90_2978 | Not Available | Positive | 3326607 - 3329807 | 116434.0 |
| putative outer membrane starch-binding protein | BCL90_2979 | Not Available | Positive | 3329847 - 3331859 | 74417.9 |
| hypothetical protein | BCL90_2980 | Not Available | Positive | 3332250 - 3333902 | 60444.8 |
| hypothetical protein | BCL90_2981 | Not Available | Positive | 3334055 - 3337216 | 116937.0 |
| hypothetical protein | BCL90_2982 | Not Available | Negative | 3337227 - 3337391 | 6172.65 |
| collagenase-like protein with putative collagen-binding domain | BCL90_2983 | Not Available | Positive | 3337413 - 3338813 | 53332.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
