Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuconolactonase | BCL90_2964 | Not Available | Negative | 3305630 - 3306451 | 32012.0 |
| l-rhamnose mutarotase | BCL90_2965 | Not Available | Negative | 3306464 - 3306793 | 12665.3 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway | BCL90_2966 | Not Available | Negative | 3306795 - 3307649 | 30990.8 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | BCL90_2967 | Not Available | Negative | 3307674 - 3308438 | 27101.6 |
| hypothetical protein | BCL90_2968 | Not Available | Positive | 3308706 - 3311441 | 103722.0 |
| hypothetical protein | BCL90_2969 | Not Available | Positive | 3311441 - 3312994 | 59725.5 |
| pectate lyase-like protein | BCL90_2970 | Not Available | Positive | 3313198 - 3314775 | 57881.4 |
| alpha-l-fucosidase 2 | BCL90_2971 | Not Available | Positive | 3314777 - 3317587 | 104569.0 |
| hypothetical protein | BCL90_2972 | Not Available | Positive | 3317584 - 3317679 | 3608.43 |
| uncharacterized protein duf4982 | BCL90_2973 | Not Available | Positive | 3317676 - 3321329 | 137410.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
