Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_2922 | Not Available | Negative | 3264663 - 3267038 | 88793.4 |
| pkd domain-containing protein | BCL90_2923 | Not Available | Negative | 3267080 - 3268060 | 36117.9 |
| hypothetical protein | BCL90_2924 | Not Available | Negative | 3268093 - 3268578 | 19096.9 |
| hypothetical protein | BCL90_2925 | Not Available | Negative | 3268589 - 3269110 | 20202.2 |
| gene 25-like lysozyme | BCL90_2926 | Not Available | Positive | 3269290 - 3269724 | 17078.5 |
| hypothetical protein | BCL90_2927 | Not Available | Positive | 3269751 - 3271616 | 71272.4 |
| type vi secretion system (t6ss) vasb/imph family protein | BCL90_2928 | Not Available | Negative | 3271753 - 3272691 | 35668.7 |
| hypothetical protein | BCL90_2929 | Not Available | Positive | 3272807 - 3273700 | 35009.3 |
| hypothetical protein | BCL90_2930 | Not Available | Positive | 3273723 - 3274862 | 43495.9 |
| xylanase (glycosyl hydrolase family 11) | BCL90_2931 | Not Available | Positive | 3275205 - 3275963 | 27573.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
