Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alpha/beta hydrolase family protein duf2235 | BCL90_2912 | Not Available | Negative | 3253527 - 3254900 | 51733.7 |
| protein of unknown function (duf2931) | BCL90_2913 | Not Available | Negative | 3254902 - 3255942 | 39489.5 |
| hypothetical protein | BCL90_2914 | Not Available | Negative | 3255939 - 3256112 | 6231.74 |
| uncharacterized protein involved in type vi secretion and phage assembly | BCL90_2915 | Not Available | Negative | 3256115 - 3257953 | 68066.1 |
| hypothetical protein | BCL90_2916 | Not Available | Negative | 3258286 - 3258681 | 14584.2 |
| hypothetical protein | BCL90_2917 | Not Available | Negative | 3258794 - 3259189 | 14589.4 |
| putative nadph-quinone reductase | BCL90_2918 | Not Available | Negative | 3259534 - 3260106 | 21725.3 |
| hypothetical protein | BCL90_2919 | Not Available | Negative | 3260230 - 3261618 | 52521.2 |
| hypothetical protein | BCL90_2920 | Not Available | Negative | 3261637 - 3262083 | 16844.8 |
| atp-dependent clp protease atp-binding subunit clpa | BCL90_2921 | Not Available | Negative | 3262141 - 3264657 | 93610.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
