Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative atpase | BCL90_2872 | Not Available | Negative | 3214355 - 3215635 | 47165.0 |
| catechol 2,3-dioxygenase-like lactoylglutathione lyase family enzyme | BCL90_2873 | Not Available | Positive | 3215756 - 3216136 | 14322.4 |
| mhs family alpha-ketoglutarate permease-like mfs transporter | BCL90_2874 | Not Available | Negative | 3216394 - 3217692 | 47635.9 |
| methyltransferase family protein | BCL90_2875 | Not Available | Positive | 3217885 - 3218616 | 28149.1 |
| histidyl-trna synthetase | BCL90_2876 | Not Available | Negative | 3218729 - 3220171 | 53487.8 |
| translation initiation factor 1 | BCL90_2877 | Not Available | Negative | 3220396 - 3220746 | 12714.4 |
| yegs/rv2252/bmru family lipid kinase | BCL90_2878 | Not Available | Negative | 3220862 - 3221764 | 32915.1 |
| methionine adenosyltransferase | BCL90_2879 | Not Available | Positive | 3221968 - 3223218 | 45918.5 |
| outer membrane transport energization protein exbd | BCL90_2880 | Not Available | Negative | 3224008 - 3224541 | 19511.9 |
| cu-zn family superoxide dismutase | BCL90_2881 | Not Available | Negative | 3224652 - 3225182 | 18848.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
