Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | BCL90_2862 | Not Available | Positive | 3204928 - 3205323 | 15518.6 |
| hypothetical protein | BCL90_2863 | Not Available | Positive | 3205307 - 3206164 | 31995.8 |
| pimeloyl-acp methyl ester carboxylesterase | BCL90_2864 | Not Available | Positive | 3206217 - 3207275 | 39954.7 |
| hypothetical protein | BCL90_2865 | Not Available | Negative | 3207458 - 3208348 | 32939.7 |
| hypothetical protein | BCL90_2866 | Not Available | Negative | 3208362 - 3209135 | 29362.3 |
| putative dehydrogenase | BCL90_2867 | Not Available | Negative | 3209213 - 3210238 | 38071.4 |
| hypothetical protein | BCL90_2868 | Not Available | Positive | 3210344 - 3210694 | 13622.6 |
| outer membrane protein ompa-like peptidoglycan-associated protein | BCL90_2869 | Not Available | Negative | 3211276 - 3211953 | 23053.7 |
| abc-2 type transport system atp-binding protein | BCL90_2870 | Not Available | Negative | 3212120 - 3212812 | 25690.8 |
| hypothetical protein | BCL90_2871 | Not Available | Negative | 3212815 - 3214287 | 56483.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
