Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rep element-mobilizing transposase rayt | BCL90_2852 | Not Available | Negative | 3194441 - 3195073 | 25656.9 |
| hypothetical protein | BCL90_2853 | Not Available | Negative | 3195522 - 3196580 | 41488.7 |
| thiol-disulfide isomerase/thioredoxin | BCL90_2854 | Not Available | Negative | 3196732 - 3197304 | 21651.6 |
| hypothetical protein | BCL90_2855 | Not Available | Positive | 3197537 - 3197824 | 10843.3 |
| iron complex outermembrane receptor protein | BCL90_2856 | Not Available | Positive | 3197938 - 3200256 | 85264.8 |
| 2,4-dienoyl-coa reductase-like nadh-dependent reductase (old yellow enzyme family) | BCL90_2857 | Not Available | Negative | 3200493 - 3201572 | 39564.9 |
| aryl-alcohol dehydrogenase-like predicted oxidoreductase | BCL90_2858 | Not Available | Negative | 3201679 - 3202668 | 36703.4 |
| thiosulfate dehydrogenase | BCL90_2859 | Not Available | Negative | 3202671 - 3203102 | 16041.3 |
| abc-2 type transport system atp-binding protein | BCL90_2860 | Not Available | Positive | 3203299 - 3204126 | 31091.9 |
| hypothetical protein | BCL90_2861 | Not Available | Positive | 3204130 - 3204927 | 30663.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
