Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf4920 | BCL90_2822 | Not Available | Positive | 3164682 - 3165146 | 17139.3 |
| branched-chain amino acid aminotransferase | BCL90_2823 | Not Available | Negative | 3165390 - 3166454 | 39410.9 |
| tryptophan 2,3-dioxygenase | BCL90_2824 | Not Available | Negative | 3166600 - 3167565 | 37646.2 |
| h+/cl- antiporter clca | BCL90_2825 | Not Available | Positive | 3167712 - 3169001 | 46140.7 |
| d-3-phosphoglycerate dehydrogenase | BCL90_2826 | Not Available | Negative | 3169295 - 3170596 | 49286.5 |
| nucleoside-diphosphate-sugar epimerase | BCL90_2827 | Not Available | Negative | 3170596 - 3171558 | 35341.5 |
| arginase family enzyme | BCL90_2828 | Not Available | Positive | 3171631 - 3172812 | 44948.9 |
| peroxiredoxin | BCL90_2829 | Not Available | Positive | 3173053 - 3174198 | 41167.6 |
| sukh superfamily protein | BCL90_2830 | Not Available | Negative | 3174268 - 3174789 | 19869.7 |
| phosphoribosylamine--glycine ligase | BCL90_2831 | Not Available | Negative | 3174786 - 3176057 | 45316.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
