Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate 1-decarboxylase | BCL90_2812 | Not Available | Negative | 3153903 - 3154253 | 12813.6 |
| pantothenate synthetase | BCL90_2813 | Not Available | Negative | 3154440 - 3155294 | 31735.5 |
| starch synthase | BCL90_2814 | Not Available | Positive | 3155429 - 3156259 | 31642.9 |
| uncharacterized protein duf4270 | BCL90_2815 | Not Available | Positive | 3156281 - 3157705 | 51408.9 |
| single-strand binding protein | BCL90_2816 | Not Available | Negative | 3157849 - 3158286 | 16384.4 |
| a/g-specific dna-adenine glycosylase | BCL90_2817 | Not Available | Negative | 3158342 - 3159403 | 40869.9 |
| dna-binding protein hu-beta | BCL90_2818 | Not Available | Positive | 3159573 - 3159875 | 11090.6 |
| tetratricopeptide repeat protein | BCL90_2819 | Not Available | Positive | 3159887 - 3160765 | 31073.4 |
| ribonuclease g | BCL90_2820 | Not Available | Positive | 3161044 - 3162594 | 58752.6 |
| dna repair protein rada/sms | BCL90_2821 | Not Available | Positive | 3162984 - 3164360 | 50149.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
